Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm5263-201ENSMUST00000163646 601 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm17159-201ENSMUST00000169043 482 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm43651-201ENSMUST00000199796 439 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm18944-201ENSMUST00000207672 643 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm6929-201ENSMUST00000210930 468 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm3690-201ENSMUST00000211341 262 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm4036-201ENSMUST00000220842 626 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 AC155314.1-201ENSMUST00000227624 508 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm25403-201ENSMUST00000082971 143 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nup88Q8CEC0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.52□□□□□ -1.69
Nup88Q8CEC0 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm4736-201ENSMUST00000100870 380 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm14142-201ENSMUST00000117833 296 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm11393-201ENSMUST00000118019 288 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm13557-201ENSMUST00000120771 382 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm13502-201ENSMUST00000121574 684 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm14903-201ENSMUST00000122435 537 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm29334-201ENSMUST00000190334 357 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm38098-201ENSMUST00000194115 241 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm35570-201ENSMUST00000198730 681 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm44099-201ENSMUST00000203299 112 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm45696-201ENSMUST00000212088 985 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm23443-201ENSMUST00000082916 128 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm22868-201ENSMUST00000083955 164 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Nup88Q8CEC0 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm2003-201ENSMUST00000118537 636 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm13852-201ENSMUST00000122350 242 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm25806-201ENSMUST00000122782 122 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm1989-201ENSMUST00000126244 636 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm24014-201ENSMUST00000157728 157 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm25037-201ENSMUST00000175418 110 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm10067-201ENSMUST00000179462 348 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm28596-201ENSMUST00000185870 696 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm29524-201ENSMUST00000190819 699 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm32295-201ENSMUST00000192558 696 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Gm31260-201ENSMUST00000193478 696 ntBASIC4.5□□□□□ -1.69
Nup88Q8CEC0 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms