Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm6797-201ENSMUST00000119440 512 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm15274-201ENSMUST00000131442 291 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm21979-201ENSMUST00000139887 291 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm15259-201ENSMUST00000151262 291 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm26148-201ENSMUST00000157430 68 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm24503-201ENSMUST00000158454 135 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Mir5112-201ENSMUST00000174897 60 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm22693-201ENSMUST00000175049 442 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm29105-201ENSMUST00000187256 450 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm9373-201ENSMUST00000208724 599 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm45312-201ENSMUST00000210566 311 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm23102-201ENSMUST00000083724 116 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc38Q8CDN8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Mir551b-201ENSMUST00000102165 98 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Mir804-201ENSMUST00000103251 95 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm23481-201ENSMUST00000104173 131 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm15244-201ENSMUST00000121122 130 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm25605-201ENSMUST00000158364 124 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm24550-201ENSMUST00000158648 279 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm16026-202ENSMUST00000159695 772 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm16569-201ENSMUST00000160526 314 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm10067-201ENSMUST00000179462 348 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm26915-201ENSMUST00000183080 748 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Mir6345-201ENSMUST00000184286 128 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm37319-201ENSMUST00000193500 636 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm3010-201ENSMUST00000198805 448 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm18660-201ENSMUST00000199542 629 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm44852-201ENSMUST00000207950 369 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm44887-201ENSMUST00000208980 178 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm45690-201ENSMUST00000210775 246 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc38Q8CDN8 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm15854-201ENSMUST00000118879 808 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm12900-201ENSMUST00000120919 573 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm13471-201ENSMUST00000122057 433 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm15075-201ENSMUST00000122187 477 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm14903-201ENSMUST00000122435 537 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm24734-201ENSMUST00000158860 262 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm18604-201ENSMUST00000172535 558 ntBASIC4.19□□□□□ -1.74
Ccdc38Q8CDN8 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms