Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Snora7a-201ENSMUST00000082629 140 ntBASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trub1Q8C0D0 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm24581-201ENSMUST00000103962 133 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm11874-201ENSMUST00000117437 130 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm13076-201ENSMUST00000118041 204 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm14541-201ENSMUST00000118985 157 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm22722-201ENSMUST00000157467 132 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm22833-201ENSMUST00000158292 132 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm22532-201ENSMUST00000158822 140 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm27864-201ENSMUST00000183704 190 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm44972-201ENSMUST00000206419 406 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm8942-201ENSMUST00000217892 400 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.38□□□□□ -1.87
Trub1Q8C0D0 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm25572-201ENSMUST00000157527 172 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm23897-201ENSMUST00000158110 158 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm5263-201ENSMUST00000163646 601 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm6486-201ENSMUST00000166202 434 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm20574-201ENSMUST00000182867 917 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm28877-201ENSMUST00000191349 604 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm36382-201ENSMUST00000198892 541 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm43922-201ENSMUST00000205071 328 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm16419-201ENSMUST00000221057 625 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trub1Q8C0D0 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.37□□□□□ -1.87
Trub1Q8C0D0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm14622-201ENSMUST00000117117 468 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm13761-201ENSMUST00000117238 807 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm15148-201ENSMUST00000117602 156 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm12757-201ENSMUST00000119465 800 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm14559-201ENSMUST00000121745 496 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm28002-201ENSMUST00000184832 100 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm28594-201ENSMUST00000187022 661 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm43899-201ENSMUST00000203675 246 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm45574-201ENSMUST00000210921 331 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm17917-201ENSMUST00000218561 953 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trub1Q8C0D0 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trub1Q8C0D0 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Trub1Q8C0D0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms