Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm17811-201ENSMUST00000206193 387 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm7380-201ENSMUST00000211599 466 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm45439-201ENSMUST00000211723 359 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm7117-201ENSMUST00000071515 387 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ubfd1Q78JW9 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm24125-201ENSMUST00000104105 137 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm12891-201ENSMUST00000119358 240 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm12852-201ENSMUST00000119478 719 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm15267-201ENSMUST00000120888 464 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm13000-201ENSMUST00000120937 496 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm23429-201ENSMUST00000122486 149 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm25334-201ENSMUST00000158036 110 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm24939-201ENSMUST00000158325 137 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm3851-201ENSMUST00000168653 318 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm17060-201ENSMUST00000172394 824 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm27676-201ENSMUST00000183669 61 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm29228-201ENSMUST00000185489 418 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm5252-201ENSMUST00000189030 909 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm42990-201ENSMUST00000199231 312 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm42458-201ENSMUST00000201914 369 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm45192-201ENSMUST00000206749 283 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm7540-201ENSMUST00000219764 926 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm9616-201ENSMUST00000221154 781 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ubfd1Q78JW9 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms