Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.86□□□□□ -1.79
Ccdc88aQ5SNZ0 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm14926-201ENSMUST00000120650 508 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm24358-201ENSMUST00000158424 288 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm6841-201ENSMUST00000220602 598 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm25373-201ENSMUST00000158156 115 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm27893-201ENSMUST00000184408 194 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Mir6398-201ENSMUST00000184541 102 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm7837-201ENSMUST00000190873 412 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm24350-202ENSMUST00000198309 132 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm42593-201ENSMUST00000198469 377 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm22249-201ENSMUST00000082485 136 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.84□□□□□ -1.79
Ccdc88aQ5SNZ0 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm18433-202ENSMUST00000195682 196 ntBASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Mir8090-201ENSMUST00000185078 136 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29320-201ENSMUST00000185235 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29179-202ENSMUST00000186138 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28598-201ENSMUST00000186490 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29448-201ENSMUST00000186675 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29314-201ENSMUST00000186800 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28253-202ENSMUST00000187971 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29268-201ENSMUST00000188669 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29169-201ENSMUST00000189835 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28069-201ENSMUST00000189926 214 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28978-201ENSMUST00000191120 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37172-201ENSMUST00000191926 615 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm44277-201ENSMUST00000205128 649 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm45200-201ENSMUST00000207434 919 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm12617-201ENSMUST00000121268 381 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm24930-201ENSMUST00000158315 83 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm18520-201ENSMUST00000174783 658 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29062-201ENSMUST00000186032 694 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29259-201ENSMUST00000186396 694 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm28255-201ENSMUST00000187101 694 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm29545-201ENSMUST00000188878 694 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37996-201ENSMUST00000191859 367 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm43355-201ENSMUST00000196541 346 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm42758-201ENSMUST00000202146 283 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.82□□□□□ -1.8
Ccdc88aQ5SNZ0 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms