Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm7676-201ENSMUST00000084055 319 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim40Q3UWA4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim40Q3UWA4 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm26273-201ENSMUST00000104180 131 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm11898-201ENSMUST00000117161 385 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm11843-201ENSMUST00000118984 425 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm15364-201ENSMUST00000119618 585 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm23906-201ENSMUST00000157573 128 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm26085-201ENSMUST00000157900 116 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm24939-201ENSMUST00000158325 137 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm3084-201ENSMUST00000169967 598 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm26365-201ENSMUST00000179177 94 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm27535-201ENSMUST00000183814 157 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm29228-201ENSMUST00000185489 418 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm6802-202ENSMUST00000186566 126 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm28594-201ENSMUST00000187022 661 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm37501-201ENSMUST00000192830 691 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm6051-201ENSMUST00000201529 352 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm8035-201ENSMUST00000204625 687 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm7726-201ENSMUST00000206241 231 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm5917-201ENSMUST00000217638 721 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm23452-201ENSMUST00000083327 107 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.65□□□□□ -1.83
Trim40Q3UWA4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm11406-201ENSMUST00000117418 484 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm8666-201ENSMUST00000117517 292 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm12998-201ENSMUST00000122445 789 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm23501-201ENSMUST00000157744 256 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Mir5106-201ENSMUST00000174936 73 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Mir6903-201ENSMUST00000183597 88 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm18117-201ENSMUST00000187720 742 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm29334-201ENSMUST00000190334 357 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm29524-201ENSMUST00000190819 699 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm36943-201ENSMUST00000194422 282 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm4248-201ENSMUST00000196905 316 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm43855-201ENSMUST00000197462 507 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm22829-201ENSMUST00000083771 106 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim40Q3UWA4 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim40Q3UWA4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms