Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm27025-201ENSMUST00000182392 942 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm10292-201ENSMUST00000183142 581 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm38283-201ENSMUST00000193041 695 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm33571-201ENSMUST00000193271 657 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm44395-201ENSMUST00000197056 153 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm45189-201ENSMUST00000208567 363 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm18487-201ENSMUST00000215826 878 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm7034-201ENSMUST00000218638 645 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Snord21-201ENSMUST00000082519 94 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Mir323-201ENSMUST00000083683 86 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr713-201ENSMUST00000098139 975 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trafd1Q3UDK1 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Trafd1Q3UDK1 Gm24403-201ENSMUST00000104616 130 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm12889-201ENSMUST00000118684 241 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm22792-201ENSMUST00000157225 133 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm22059-201ENSMUST00000157544 104 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm10357-201ENSMUST00000159886 264 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm16101-201ENSMUST00000160695 430 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trafd1Q3UDK1 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm13676-201ENSMUST00000122185 591 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm26276-201ENSMUST00000157099 109 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm25971-201ENSMUST00000158953 286 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm17967-201ENSMUST00000195319 647 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm18585-201ENSMUST00000215197 556 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm6841-201ENSMUST00000220602 598 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trafd1Q3UDK1 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms