Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm26204-201ENSMUST00000082906 107 ntBASIC6.24□□□□□ -1.41
Rnf40Q3U319 Mir342-201ENSMUST00000083502 99 ntBASIC6.24□□□□□ -1.41
Rnf40Q3U319 Mir455-201ENSMUST00000093594 82 ntBASIC6.24□□□□□ -1.41
Rnf40Q3U319 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.24□□□□□ -1.41
Rnf40Q3U319 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf40Q3U319 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Rnf40Q3U319 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.24□□□□□ -1.41
Rnf40Q3U319 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Rnf40Q3U319 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.24□□□□□ -1.41
Rnf40Q3U319 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf40Q3U319 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm24121-201ENSMUST00000102029 106 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm12779-201ENSMUST00000121496 143 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm23151-201ENSMUST00000178061 107 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm24862-201ENSMUST00000179103 79 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm23310-201ENSMUST00000179105 79 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm25461-201ENSMUST00000179293 79 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm25473-201ENSMUST00000180191 107 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Mir7212-201ENSMUST00000184098 61 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm7329-201ENSMUST00000185915 210 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm5329-201ENSMUST00000186898 463 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm29657-201ENSMUST00000189807 342 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm36939-201ENSMUST00000194889 439 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm44319-201ENSMUST00000196974 93 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm44075-201ENSMUST00000204208 216 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 AC152979.1-201ENSMUST00000218214 289 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm5899-201ENSMUST00000071770 270 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf40Q3U319 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf40Q3U319 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf40Q3U319 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.23□□□□□ -1.41
Rnf40Q3U319 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm5347-201ENSMUST00000210542 2327 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm22103-201ENSMUST00000116733 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm26475-201ENSMUST00000116769 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm23620-201ENSMUST00000116812 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm25042-201ENSMUST00000116856 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm25540-201ENSMUST00000116880 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm6574-201ENSMUST00000120037 362 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm14846-201ENSMUST00000121868 216 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm12226-201ENSMUST00000144172 876 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Mir1946a-201ENSMUST00000158360 134 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm23550-201ENSMUST00000179003 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm25123-201ENSMUST00000179154 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm25353-201ENSMUST00000179366 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm22992-201ENSMUST00000179496 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm25892-201ENSMUST00000179867 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm24092-201ENSMUST00000180257 121 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm27545-201ENSMUST00000184755 202 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm27624-201ENSMUST00000185047 177 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm22297-201ENSMUST00000083312 106 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Snora30-201ENSMUST00000083325 130 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.22□□□□□ -1.41
Rnf40Q3U319 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rnf40Q3U319 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.21□□□□□ -1.41
Rnf40Q3U319 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rnf40Q3U319 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rnf40Q3U319 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.21□□□□□ -1.41
Rnf40Q3U319 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Rnf40Q3U319 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.21□□□□□ -1.42
Rnf40Q3U319 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.21□□□□□ -1.42
Rnf40Q3U319 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.21□□□□□ -1.42
Rnf40Q3U319 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms