Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm42539-201ENSMUST00000197009 308 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Gm43039-201ENSMUST00000202883 963 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Gm7946-201ENSMUST00000203326 958 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Ddb1Q3U1J4 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm15783-201ENSMUST00000117521 633 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm14687-201ENSMUST00000120206 363 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm12825-201ENSMUST00000120249 563 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm13865-201ENSMUST00000120957 865 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm14473-201ENSMUST00000122269 557 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm7855-201ENSMUST00000137737 687 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm22390-201ENSMUST00000157588 325 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Mir7062-201ENSMUST00000185038 66 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm29105-201ENSMUST00000187256 450 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm37828-201ENSMUST00000192496 432 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm35702-201ENSMUST00000198653 511 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm44946-201ENSMUST00000208425 572 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Ddb1Q3U1J4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm25097-201ENSMUST00000104042 145 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm11943-201ENSMUST00000119473 327 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm14848-201ENSMUST00000121850 467 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm23885-201ENSMUST00000122682 294 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm26271-201ENSMUST00000158349 104 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm22776-201ENSMUST00000178634 94 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm23767-201ENSMUST00000179278 94 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Mir7j-201ENSMUST00000184427 122 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm18356-201ENSMUST00000185677 623 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm9775-201ENSMUST00000189402 331 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm37433-201ENSMUST00000192695 678 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm37441-201ENSMUST00000194430 678 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm42694-201ENSMUST00000196951 358 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm18429-201ENSMUST00000198707 421 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm44294-201ENSMUST00000205090 728 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Gm44634-201ENSMUST00000206119 152 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.44□□□□□ -1.54
Ddb1Q3U1J4 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm22072-201ENSMUST00000116850 121 ntBASIC5.43□□□□□ -1.54
Ddb1Q3U1J4 Gm12102-201ENSMUST00000118251 604 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms