Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp39Q3TIX9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Mir669g-201ENSMUST00000116809 123 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm11346-201ENSMUST00000118346 704 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm12448-201ENSMUST00000118852 655 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm12880-201ENSMUST00000120652 494 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm25874-201ENSMUST00000178030 79 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm28008-201ENSMUST00000184021 186 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm28769-201ENSMUST00000190176 615 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Trbv8-201ENSMUST00000194020 285 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm43624-201ENSMUST00000197368 180 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm45063-201ENSMUST00000203726 472 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm44149-201ENSMUST00000204256 226 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm45312-201ENSMUST00000210566 311 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm5917-201ENSMUST00000217638 721 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm24166-201ENSMUST00000082724 135 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp39Q3TIX9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Usp39Q3TIX9 Gm23746-201ENSMUST00000104229 125 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm26156-201ENSMUST00000116999 123 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm11196-201ENSMUST00000119052 395 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm11352-201ENSMUST00000119264 517 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm13213-201ENSMUST00000119668 474 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm12515-201ENSMUST00000120116 361 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm12755-201ENSMUST00000122297 282 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm7855-201ENSMUST00000137737 687 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm22236-201ENSMUST00000157093 106 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm25970-201ENSMUST00000157165 86 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm25944-201ENSMUST00000178758 94 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm19206-201ENSMUST00000186401 827 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm5983-201ENSMUST00000197739 770 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm46234-201ENSMUST00000218702 259 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm7822-201ENSMUST00000222433 581 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm9512-201ENSMUST00000223112 497 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Usp39Q3TIX9 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms