Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm24124-201ENSMUST00000104103 132 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm24132-201ENSMUST00000104745 91 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm15016-201ENSMUST00000117300 720 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm15002-201ENSMUST00000118406 452 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm6829-201ENSMUST00000119858 360 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm13998-201ENSMUST00000120952 335 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm15096-201ENSMUST00000121918 878 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm25150-201ENSMUST00000157121 60 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm25966-201ENSMUST00000157169 117 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm23219-201ENSMUST00000158123 87 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm24006-201ENSMUST00000158462 132 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Mir7658-201ENSMUST00000184043 57 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm37774-201ENSMUST00000194401 245 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm43600-201ENSMUST00000202134 223 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm18468-201ENSMUST00000207321 369 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm18465-201ENSMUST00000207468 369 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm18458-201ENSMUST00000207908 369 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm23239-201ENSMUST00000083006 181 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm37387-201ENSMUST00000192201 1806 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col9a1Q05722 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col9a1Q05722 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.1□□□□□ -1.43
Col9a1Q05722 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm22784-201ENSMUST00000104088 132 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm22103-201ENSMUST00000116733 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm26475-201ENSMUST00000116769 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm23620-201ENSMUST00000116812 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm25042-201ENSMUST00000116856 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm25540-201ENSMUST00000116880 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm14706-201ENSMUST00000117744 255 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm15426-201ENSMUST00000117823 556 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm11781-201ENSMUST00000118328 472 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm12495-201ENSMUST00000119750 447 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm12190-201ENSMUST00000120001 187 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm13531-201ENSMUST00000121893 543 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm23550-201ENSMUST00000179003 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm25123-201ENSMUST00000179154 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm25353-201ENSMUST00000179366 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm22992-201ENSMUST00000179496 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm25892-201ENSMUST00000179867 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm24092-201ENSMUST00000180257 121 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm21960-201ENSMUST00000181924 452 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm42799-201ENSMUST00000201331 328 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm45315-201ENSMUST00000209283 333 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 AC129308.2-201ENSMUST00000224588 789 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col9a1Q05722 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.09□□□□□ -1.43
Col9a1Q05722 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.09□□□□□ -1.44
Col9a1Q05722 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col9a1Q05722 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.09□□□□□ -1.44
Col9a1Q05722 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col9a1Q05722 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Col9a1Q05722 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col9a1Q05722 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col9a1Q05722 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.08□□□□□ -1.44
Col9a1Q05722 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col9a1Q05722 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms