Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cux1P53564 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.88□□□□□ -1.63
Cux1P53564 Gm21112-201ENSMUST00000212224 578 ntBASIC4.88□□□□□ -1.63
Cux1P53564 Gm7760-201ENSMUST00000212265 578 ntBASIC4.88□□□□□ -1.63
Cux1P53564 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.88□□□□□ -1.63
Cux1P53564 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cux1P53564 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.88□□□□□ -1.63
Cux1P53564 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cux1P53564 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cux1P53564 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.88□□□□□ -1.63
Cux1P53564 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cux1P53564 Mir7118-201ENSMUST00000197760 61 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.87□□□□□ -1.63
Cux1P53564 Gm23136-201ENSMUST00000083425 99 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cux1P53564 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cux1P53564 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cux1P53564 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.87□□□□□ -1.63
Cux1P53564 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cux1P53564 Gm9119-201ENSMUST00000118866 495 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Gm25456-201ENSMUST00000157952 109 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Gm28141-201ENSMUST00000186676 342 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Gm37966-201ENSMUST00000193122 326 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.87□□□□□ -1.63
Cux1P53564 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.87□□□□□ -1.63
Cux1P53564 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cux1P53564 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cux1P53564 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cux1P53564 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cux1P53564 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cux1P53564 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.86□□□□□ -1.63
Cux1P53564 Gm24122-201ENSMUST00000104107 132 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cux1P53564 Gm16274-201ENSMUST00000139251 592 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm22214-201ENSMUST00000157563 172 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm25373-201ENSMUST00000158156 115 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm20651-201ENSMUST00000177219 329 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
Cux1P53564 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cux1P53564 Mir8096-201ENSMUST00000184526 127 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm7837-201ENSMUST00000190873 412 ntBASIC4.86□□□□□ -1.63
Cux1P53564 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm32222-201ENSMUST00000203296 298 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm44223-201ENSMUST00000204854 114 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Gm7443-201ENSMUST00000206355 378 ntBASIC4.86□□□□□ -1.63
Cux1P53564 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.86□□□□□ -1.63
Cux1P53564 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.86□□□□□ -1.63
Cux1P53564 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.86□□□□□ -1.63
Cux1P53564 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cux1P53564 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cux1P53564 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.85□□□□□ -1.63
Cux1P53564 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Cux1P53564 Mir291a-201ENSMUST00000104815 82 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cux1P53564 Gm13121-201ENSMUST00000120637 632 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm5123-201ENSMUST00000121905 837 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm5755-201ENSMUST00000152394 837 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.85□□□□□ -1.63
Cux1P53564 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cux1P53564 Gm6140-201ENSMUST00000192494 966 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm42578-201ENSMUST00000199960 194 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm44399-201ENSMUST00000205043 226 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm17917-201ENSMUST00000218561 953 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Gm4052-201ENSMUST00000220890 451 ntBASIC4.85□□□□□ -1.63
Cux1P53564 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cux1P53564 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cux1P53564 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Cux1P53564 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cux1P53564 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cux1P53564 Gm11471-201ENSMUST00000121824 198 ntBASIC4.84□□□□□ -1.63
Cux1P53564 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cux1P53564 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.84□□□□□ -1.63
Cux1P53564 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.84□□□□□ -1.63
Cux1P53564 Gm22864-201ENSMUST00000083950 130 ntBASIC4.84□□□□□ -1.63
Cux1P53564 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cux1P53564 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cux1P53564 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cux1P53564 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.84□□□□□ -1.64
Cux1P53564 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.84□□□□□ -1.64
Cux1P53564 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm11321-201ENSMUST00000121257 902 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.83□□□□□ -1.64
Cux1P53564 Gm26041-201ENSMUST00000158148 108 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm23824-201ENSMUST00000158741 276 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm36382-201ENSMUST00000198892 541 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm45317-201ENSMUST00000210385 223 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm5917-201ENSMUST00000217638 721 ntBASIC4.83□□□□□ -1.64
Cux1P53564 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms