Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HttP42859 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HttP42859 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HttP42859 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HttP42859 Gm22472-201ENSMUST00000104115 134 ntBASIC3.3□□□□□ -1.88
HttP42859 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HttP42859 Gm12598-201ENSMUST00000117333 830 ntBASIC3.3□□□□□ -1.88
HttP42859 Gm24240-201ENSMUST00000157785 135 ntBASIC3.3□□□□□ -1.88
HttP42859 Gm19203-201ENSMUST00000174049 939 ntBASIC3.3□□□□□ -1.88
HttP42859 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HttP42859 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HttP42859 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HttP42859 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HttP42859 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HttP42859 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HttP42859 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HttP42859 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.29□□□□□ -1.88
HttP42859 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Gm28141-201ENSMUST00000186676 342 ntBASIC3.29□□□□□ -1.88
HttP42859 Gm18672-201ENSMUST00000208035 270 ntBASIC3.29□□□□□ -1.88
HttP42859 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.29□□□□□ -1.88
HttP42859 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC3.29□□□□□ -1.88
HttP42859 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HttP42859 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.29□□□□□ -1.88
HttP42859 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.29□□□□□ -1.88
HttP42859 Gm2676-201ENSMUST00000207279 606 ntBASIC3.29□□□□□ -1.88
HttP42859 Gm18585-201ENSMUST00000215197 556 ntBASIC3.29□□□□□ -1.88
HttP42859 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.29□□□□□ -1.88
HttP42859 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.29□□□□□ -1.88
HttP42859 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.29□□□□□ -1.88
HttP42859 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HttP42859 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Gm23591-201ENSMUST00000157663 286 ntBASIC3.28□□□□□ -1.88
HttP42859 Gm24402-201ENSMUST00000157873 91 ntBASIC3.28□□□□□ -1.88
HttP42859 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HttP42859 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.28□□□□□ -1.88
HttP42859 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.28□□□□□ -1.88
HttP42859 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HttP42859 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.28□□□□□ -1.88
HttP42859 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.28□□□□□ -1.88
HttP42859 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.28□□□□□ -1.88
HttP42859 Gm7439-201ENSMUST00000214053 835 ntBASIC3.28□□□□□ -1.88
HttP42859 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.28□□□□□ -1.88
HttP42859 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HttP42859 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HttP42859 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HttP42859 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HttP42859 Gm18433-202ENSMUST00000195682 196 ntBASIC3.28□□□□□ -1.88
HttP42859 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.28□□□□□ -1.88
HttP42859 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.28□□□□□ -1.88
HttP42859 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HttP42859 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HttP42859 Gm13607-201ENSMUST00000117875 539 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm14570-201ENSMUST00000119444 391 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm15377-201ENSMUST00000119594 246 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm29484-201ENSMUST00000186067 324 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC3.27□□□□□ -1.89
HttP42859 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HttP42859 Gm35405-201ENSMUST00000218754 400 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm10343-201ENSMUST00000096279 348 ntBASIC3.27□□□□□ -1.89
HttP42859 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HttP42859 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm13751-201ENSMUST00000120280 752 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.27□□□□□ -1.89
HttP42859 Gm20450-201ENSMUST00000173652 147 ntBASIC3.27□□□□□ -1.89
HttP42859 Nsd1-207ENSMUST00000224973 9905 ntBASIC3.27□□□□□ -1.89
HttP42859 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.27□□□□□ -1.89
HttP42859 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HttP42859 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Gm15272-201ENSMUST00000120865 233 ntBASIC3.26□□□□□ -1.89
HttP42859 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.26□□□□□ -1.89
HttP42859 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HttP42859 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HttP42859 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms