Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Traf1P39428 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Traf1P39428 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Traf1P39428 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Traf1P39428 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Gm13268-201ENSMUST00000117485 433 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm12889-201ENSMUST00000118684 241 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm14599-201ENSMUST00000120469 474 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm15263-201ENSMUST00000121556 642 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm11645-201ENSMUST00000121589 649 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Gm26148-201ENSMUST00000157430 68 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Traf1P39428 Gm22120-201ENSMUST00000175590 70 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Mir713-201ENSMUST00000178651 108 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Gm14527-201ENSMUST00000179300 639 ntBASIC4.57□□□□□ -1.68
Traf1P39428 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Traf1P39428 Gm44349-201ENSMUST00000197048 123 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.57□□□□□ -1.68
Traf1P39428 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Gm18338-201ENSMUST00000222381 560 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Traf1P39428 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Traf1P39428 Gm22575-201ENSMUST00000082981 110 ntBASIC4.57□□□□□ -1.68
Traf1P39428 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Traf1P39428 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Traf1P39428 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.57□□□□□ -1.68
Traf1P39428 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm25420-201ENSMUST00000104216 127 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.56□□□□□ -1.68
Traf1P39428 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.56□□□□□ -1.68
Traf1P39428 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm26276-201ENSMUST00000157099 109 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm23540-201ENSMUST00000157543 164 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm25224-201ENSMUST00000158195 68 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm2862-201ENSMUST00000161524 328 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm25120-201ENSMUST00000180148 79 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm27952-201ENSMUST00000184748 105 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Gm37002-201ENSMUST00000194560 373 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm6112-201ENSMUST00000208037 629 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm7034-201ENSMUST00000218638 645 ntBASIC4.56□□□□□ -1.68
Traf1P39428 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm25200-201ENSMUST00000083094 130 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Olfr713-201ENSMUST00000098139 975 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Traf1P39428 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.56□□□□□ -1.68
Traf1P39428 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Traf1P39428 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Traf1P39428 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Traf1P39428 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Traf1P39428 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Traf1P39428 Gm22543-201ENSMUST00000104347 94 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Traf1P39428 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Traf1P39428 Gm11898-201ENSMUST00000117161 385 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm11874-201ENSMUST00000117437 130 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm11566-201ENSMUST00000118550 203 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm11931-201ENSMUST00000121630 447 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm14905-201ENSMUST00000122351 639 ntBASIC4.55□□□□□ -1.68
Traf1P39428 Gm22208-201ENSMUST00000122658 110 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms