Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm5285-201ENSMUST00000193089 666 ntBASIC5.66□□□□□ -1.5
RaraP11416 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.66□□□□□ -1.5
RaraP11416 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm44063-201ENSMUST00000203307 376 ntBASIC5.66□□□□□ -1.5
RaraP11416 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Gm5750-201ENSMUST00000218711 801 ntBASIC5.66□□□□□ -1.5
RaraP11416 Gm4012-201ENSMUST00000221504 581 ntBASIC5.66□□□□□ -1.5
RaraP11416 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.66□□□□□ -1.5
RaraP11416 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.66□□□□□ -1.5
RaraP11416 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RaraP11416 Mir27a-201ENSMUST00000083510 87 ntBASIC5.66□□□□□ -1.5
RaraP11416 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.66□□□□□ -1.5
RaraP11416 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RaraP11416 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.66□□□□□ -1.5
RaraP11416 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RaraP11416 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.66□□□□□ -1.5
RaraP11416 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.66□□□□□ -1.5
RaraP11416 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.65□□□□□ -1.5
RaraP11416 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RaraP11416 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RaraP11416 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.65□□□□□ -1.5
RaraP11416 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Gm15981-201ENSMUST00000119196 457 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm8430-201ENSMUST00000119780 471 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm14269-201ENSMUST00000120455 306 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm15267-201ENSMUST00000120888 464 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm7670-201ENSMUST00000121272 641 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm13973-201ENSMUST00000121371 894 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Gm24439-201ENSMUST00000157894 117 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm6632-201ENSMUST00000168425 954 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm25156-201ENSMUST00000179809 79 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.65□□□□□ -1.5
RaraP11416 Mir6363-201ENSMUST00000184880 114 ntBASIC5.65□□□□□ -1.5
RaraP11416 Mir7028-201ENSMUST00000185016 64 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm44385-201ENSMUST00000198781 81 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm44083-201ENSMUST00000203114 337 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm17989-201ENSMUST00000211543 412 ntBASIC5.65□□□□□ -1.5
RaraP11416 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.65□□□□□ -1.5
RaraP11416 Gm18116-201ENSMUST00000220920 537 ntBASIC5.65□□□□□ -1.5
RaraP11416 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.65□□□□□ -1.5
RaraP11416 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RaraP11416 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RaraP11416 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.65□□□□□ -1.5
RaraP11416 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
RaraP11416 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RaraP11416 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RaraP11416 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RaraP11416 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.65□□□□□ -1.51
RaraP11416 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RaraP11416 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RaraP11416 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RaraP11416 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.64□□□□□ -1.51
RaraP11416 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RaraP11416 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm23988-201ENSMUST00000117034 122 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm14086-201ENSMUST00000117152 173 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm12245-201ENSMUST00000117266 357 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm12871-201ENSMUST00000118758 438 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm12693-201ENSMUST00000121965 483 ntBASIC5.64□□□□□ -1.51
RaraP11416 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.64□□□□□ -1.51
RaraP11416 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.64□□□□□ -1.51
RaraP11416 Gm23669-201ENSMUST00000157470 128 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm23225-201ENSMUST00000158121 114 ntBASIC5.64□□□□□ -1.51
RaraP11416 Mir3112-201ENSMUST00000175431 82 ntBASIC5.64□□□□□ -1.51
RaraP11416 Mir5624-201ENSMUST00000176635 61 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm22290-201ENSMUST00000177655 107 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm22583-201ENSMUST00000178031 107 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm27688-201ENSMUST00000183634 91 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm8241-201ENSMUST00000189286 816 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm38044-201ENSMUST00000192964 487 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm43968-201ENSMUST00000203388 389 ntBASIC5.64□□□□□ -1.51
RaraP11416 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Gm45710-201ENSMUST00000212847 215 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.64□□□□□ -1.51
RaraP11416 Gm5955-201ENSMUST00000222712 219 ntBASIC5.64□□□□□ -1.51
RaraP11416 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.64□□□□□ -1.51
RaraP11416 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RaraP11416 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
RaraP11416 Gm25139-201ENSMUST00000083247 210 ntBASIC5.64□□□□□ -1.51
RaraP11416 Mir20a-201ENSMUST00000083508 107 ntBASIC5.64□□□□□ -1.51
RaraP11416 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms