Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm9003-201ENSMUST00000121810 482 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm23789-201ENSMUST00000122536 301 ntBASIC4.06□□□□□ -1.76
Lire1P11260 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.06□□□□□ -1.76
Lire1P11260 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.06□□□□□ -1.76
Lire1P11260 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lire1P11260 Gm22243-201ENSMUST00000178754 120 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm27883-201ENSMUST00000183941 102 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm29228-201ENSMUST00000185489 418 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.06□□□□□ -1.76
Lire1P11260 Gm8823-201ENSMUST00000193158 433 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm37005-201ENSMUST00000193281 1164 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm37636-201ENSMUST00000193583 359 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm38356-201ENSMUST00000194313 408 ntBASIC4.06□□□□□ -1.76
Lire1P11260 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm29793-201ENSMUST00000202874 460 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm44852-201ENSMUST00000207950 369 ntBASIC4.06□□□□□ -1.76
Lire1P11260 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.06□□□□□ -1.76
Lire1P11260 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.06□□□□□ -1.76
Lire1P11260 AC163664.1-201ENSMUST00000226251 1248 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lire1P11260 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lire1P11260 Gm25004-201ENSMUST00000083811 161 ntBASIC4.06□□□□□ -1.76
Lire1P11260 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Lire1P11260 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.06□□□□□ -1.76
Lire1P11260 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Lire1P11260 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lire1P11260 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lire1P11260 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.05□□□□□ -1.76
Lire1P11260 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lire1P11260 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm43256-201ENSMUST00000199995 3091 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lire1P11260 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm12467-201ENSMUST00000117625 745 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm7363-201ENSMUST00000119883 399 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm14656-201ENSMUST00000120342 502 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm11233-201ENSMUST00000122357 634 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC4.05□□□□□ -1.76
Lire1P11260 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm24289-201ENSMUST00000157629 135 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm23496-201ENSMUST00000157741 248 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm22211-201ENSMUST00000158097 156 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.05□□□□□ -1.76
Lire1P11260 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm13144-201ENSMUST00000179385 345 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.05□□□□□ -1.76
Lire1P11260 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.05□□□□□ -1.76
Lire1P11260 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.05□□□□□ -1.76
Lire1P11260 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.05□□□□□ -1.76
Lire1P11260 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.05□□□□□ -1.76
Lire1P11260 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lire1P11260 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.05□□□□□ -1.76
Lire1P11260 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lire1P11260 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm15125-201ENSMUST00000116185 800 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm11914-201ENSMUST00000117094 507 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm11577-201ENSMUST00000118030 737 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm13122-201ENSMUST00000118380 453 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm12803-201ENSMUST00000118907 821 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm14881-201ENSMUST00000120366 372 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm11446-201ENSMUST00000121319 866 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm14578-201ENSMUST00000122166 391 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lire1P11260 Gm24060-201ENSMUST00000157494 95 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm24939-201ENSMUST00000158325 137 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm25264-201ENSMUST00000158519 117 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm27715-201ENSMUST00000184714 260 ntBASIC4.04□□□□□ -1.76
Lire1P11260 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.04□□□□□ -1.76
Lire1P11260 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.04□□□□□ -1.76
Lire1P11260 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.04□□□□□ -1.76
Lire1P11260 Gm37828-201ENSMUST00000192496 432 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms