Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm42758-201ENSMUST00000202146 283 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd4P10628 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd4P10628 Gm44779-201ENSMUST00000206937 708 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.56□□□□□ -1.68
Hoxd4P10628 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Hoxd4P10628 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.56□□□□□ -1.68
Hoxd4P10628 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.56□□□□□ -1.68
Hoxd4P10628 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Hoxd4P10628 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hoxd4P10628 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm12235-201ENSMUST00000118596 170 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm13082-201ENSMUST00000118877 561 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm15106-201ENSMUST00000119691 821 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm14364-201ENSMUST00000129209 267 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm27385-201ENSMUST00000184747 104 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.55□□□□□ -1.68
Hoxd4P10628 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm37681-201ENSMUST00000193880 727 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm43723-201ENSMUST00000196886 189 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.55□□□□□ -1.68
Hoxd4P10628 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm44634-201ENSMUST00000206119 152 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.55□□□□□ -1.68
Hoxd4P10628 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.55□□□□□ -1.68
Hoxd4P10628 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm24207-201ENSMUST00000082781 108 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Gm10222-201ENSMUST00000088336 294 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.55□□□□□ -1.68
Hoxd4P10628 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hoxd4P10628 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hoxd4P10628 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Svet1-201ENSMUST00000209370 3940 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm22194-201ENSMUST00000116869 95 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm11196-201ENSMUST00000119052 395 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm13064-201ENSMUST00000119125 557 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm13804-201ENSMUST00000119552 172 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm14534-201ENSMUST00000120045 357 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm14736-201ENSMUST00000121470 336 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm12650-201ENSMUST00000121966 258 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm23118-201ENSMUST00000122657 187 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm3470-201ENSMUST00000160819 420 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm22348-201ENSMUST00000178674 79 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm27660-201ENSMUST00000184028 208 ntBASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd4P10628 Gm2719-201ENSMUST00000191929 444 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms