Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col3a1P08121 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.41□□□□□ -1.7
Col3a1P08121 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.4□□□□□ -1.7
Col3a1P08121 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col3a1P08121 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col3a1P08121 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.4□□□□□ -1.7
Col3a1P08121 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.4□□□□□ -1.7
Col3a1P08121 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Col3a1P08121 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col3a1P08121 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.4□□□□□ -1.7
Col3a1P08121 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col3a1P08121 Gm13806-201ENSMUST00000117822 325 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm13865-201ENSMUST00000120957 865 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm11896-201ENSMUST00000121105 820 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm11891-201ENSMUST00000121241 619 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm8244-201ENSMUST00000121254 264 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm23755-201ENSMUST00000157578 343 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm9890-201ENSMUST00000171867 537 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm43217-201ENSMUST00000199513 367 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm43367-201ENSMUST00000199986 625 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm44253-201ENSMUST00000203387 628 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm17989-201ENSMUST00000211543 412 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm22287-201ENSMUST00000083197 107 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col3a1P08121 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col3a1P08121 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col3a1P08121 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col3a1P08121 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col3a1P08121 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.4□□□□□ -1.71
Col3a1P08121 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col3a1P08121 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm26377-201ENSMUST00000102184 108 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm14795-201ENSMUST00000118461 471 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm11913-201ENSMUST00000119094 336 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm14623-201ENSMUST00000121398 603 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm13459-201ENSMUST00000121558 646 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm12412-201ENSMUST00000121867 328 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm26487-201ENSMUST00000158022 94 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col3a1P08121 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm29513-201ENSMUST00000185741 202 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm38166-201ENSMUST00000191660 471 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm18414-201ENSMUST00000210858 694 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AL929417.1-201ENSMUST00000214901 124 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col3a1P08121 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col3a1P08121 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm22971-201ENSMUST00000083305 97 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col3a1P08121 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.39□□□□□ -1.71
Col3a1P08121 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col3a1P08121 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm15488-201ENSMUST00000121682 670 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm24627-201ENSMUST00000122764 138 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm18396-201ENSMUST00000177095 361 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.38□□□□□ -1.71
Col3a1P08121 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col3a1P08121 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Col3a1P08121 Gm42832-201ENSMUST00000196361 745 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm42581-201ENSMUST00000201774 966 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm43884-201ENSMUST00000204251 559 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 Gm45247-201ENSMUST00000210757 309 ntBASIC4.38□□□□□ -1.71
Col3a1P08121 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms