Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm44404-201ENSMUST00000203979 636 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm3829-201ENSMUST00000222362 619 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm43831-201ENSMUST00000200461 2598 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Mir676-201ENSMUST00000102443 89 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm15001-201ENSMUST00000117657 795 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm16458-201ENSMUST00000121428 502 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm23540-201ENSMUST00000157543 164 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm25447-201ENSMUST00000158997 128 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Mir6411-201ENSMUST00000183556 108 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm29524-201ENSMUST00000190819 699 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm8132-201ENSMUST00000204938 640 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm8724-201ENSMUST00000081668 483 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm23452-201ENSMUST00000083327 107 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.56□□□□□ -1.84
Shank1D3YZU1 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm12760-201ENSMUST00000117861 482 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm12276-201ENSMUST00000121709 301 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm29073-201ENSMUST00000185563 664 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm29165-201ENSMUST00000190655 664 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm29211-201ENSMUST00000191470 664 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm37219-201ENSMUST00000192036 926 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm44118-201ENSMUST00000204665 229 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm44513-201ENSMUST00000206811 439 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm21112-201ENSMUST00000212224 578 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm7760-201ENSMUST00000212265 578 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm6171-201ENSMUST00000220760 645 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm10916-201ENSMUST00000080330 483 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm24707-201ENSMUST00000082812 107 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Shank1D3YZU1 Gm8674-201ENSMUST00000179367 3047 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms