Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm9308-201ENSMUST00000119073 448 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm13064-201ENSMUST00000119125 557 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm12873-201ENSMUST00000119988 422 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm13459-201ENSMUST00000121558 646 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm12001-201ENSMUST00000121727 913 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm25965-201ENSMUST00000157170 93 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm24014-201ENSMUST00000157728 157 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Samd15-201ENSMUST00000169669 1194 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm8807-201ENSMUST00000179328 492 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm27828-201ENSMUST00000184108 119 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Mir6238-201ENSMUST00000184140 129 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.35□□□□□ -1.87
CtcflA2APF3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm8790-201ENSMUST00000194108 322 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm42453-201ENSMUST00000200477 409 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm7468-201ENSMUST00000203900 652 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CtcflA2APF3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CtcflA2APF3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.35□□□□□ -1.87
CtcflA2APF3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CtcflA2APF3 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm14753-201ENSMUST00000118503 246 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm11506-201ENSMUST00000122414 470 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm22107-201ENSMUST00000122548 100 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm25555-201ENSMUST00000158078 111 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm18415-201ENSMUST00000177464 647 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Mir3620-201ENSMUST00000184710 61 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm27163-201ENSMUST00000184767 409 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CtcflA2APF3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.34□□□□□ -1.87
CtcflA2APF3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm37319-201ENSMUST00000193500 636 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm44354-201ENSMUST00000196017 143 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm18660-201ENSMUST00000199542 629 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm44665-201ENSMUST00000205381 251 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.34□□□□□ -1.87
CtcflA2APF3 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm18043-201ENSMUST00000216741 739 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Gm17829-201ENSMUST00000219782 344 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.34□□□□□ -1.87
CtcflA2APF3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CtcflA2APF3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CtcflA2APF3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CtcflA2APF3 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.34□□□□□ -1.88
CtcflA2APF3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.33□□□□□ -1.88
CtcflA2APF3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CtcflA2APF3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm13650-201ENSMUST00000117729 433 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm14771-201ENSMUST00000118249 203 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm14172-201ENSMUST00000118255 644 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm15951-201ENSMUST00000118377 400 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm11931-201ENSMUST00000121630 447 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm16331-201ENSMUST00000144274 498 ntBASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.33□□□□□ -1.88
CtcflA2APF3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms