Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H2afb2S4R1M3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Gm10653-202ENSMUST00000139570 835 ntBASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Gm20760-201ENSMUST00000179197 648 ntBASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb2S4R1M3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb2S4R1M3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb2S4R1M3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb2S4R1M3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb2S4R1M3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms