Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb1S4R1E0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Gm26571-201ENSMUST00000181399 666 ntBASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb1S4R1E0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Gm8495-201ENSMUST00000188740 694 ntBASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Gm38285-201ENSMUST00000192928 922 ntBASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb1S4R1E0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb1S4R1E0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Gm44549-201ENSMUST00000208351 577 ntBASIC15.72■□□□□ 0.11
H2afb1S4R1E0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb1S4R1E0 Flg-201ENSMUST00000050758 1488 ntBASIC15.71■□□□□ 0.11
H2afb1S4R1E0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms