Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shroom3Q9QXN0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Gm4974-201ENSMUST00000209974 875 ntBASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shroom3Q9QXN0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Gm18958-201ENSMUST00000174258 762 ntBASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.41■□□□□ 0.38
Shroom3Q9QXN0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Gm8969-201ENSMUST00000199694 526 ntBASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Shroom3Q9QXN0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Odf3b-204ENSMUST00000227834 930 ntBASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.39■□□□□ 0.37
Shroom3Q9QXN0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom3Q9QXN0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.37■□□□□ 0.37
Shroom3Q9QXN0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms