Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Timp4Q9JHB3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Timp4Q9JHB3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.02■□□□□ 0.47
Timp4Q9JHB3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Timp4Q9JHB3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Timp4Q9JHB3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.01■□□□□ 0.47
Timp4Q9JHB3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Timp4Q9JHB3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Timp4Q9JHB3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18■□□□□ 0.47
Timp4Q9JHB3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Gm13474-201ENSMUST00000122466 815 ntBASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Timp4Q9JHB3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.98■□□□□ 0.47
Timp4Q9JHB3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Timp4Q9JHB3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Timp4Q9JHB3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms