Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NckipsdQ9ESJ4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.08■□□□□ 0.48
NckipsdQ9ESJ4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NckipsdQ9ESJ4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NckipsdQ9ESJ4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NckipsdQ9ESJ4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Mir1668-201ENSMUST00000184114 107 ntBASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NckipsdQ9ESJ4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm27389-201ENSMUST00000183622 195 ntBASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm21559-201ENSMUST00000220638 855 ntBASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm8587-201ENSMUST00000076538 843 ntBASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gm10819-201ENSMUST00000099988 561 ntBASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NckipsdQ9ESJ4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Gm7213-201ENSMUST00000215977 950 ntBASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NckipsdQ9ESJ4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Gm33142-201ENSMUST00000193913 867 ntBASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NckipsdQ9ESJ4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Gm25016-201ENSMUST00000158399 131 ntBASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NckipsdQ9ESJ4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms