Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps35Q9EQH3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Gm8969-201ENSMUST00000199694 526 ntBASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Vps35Q9EQH3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps35Q9EQH3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps35Q9EQH3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Vps35Q9EQH3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps35Q9EQH3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps35Q9EQH3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps35Q9EQH3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps35Q9EQH3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Gm715-201ENSMUST00000117865 831 ntBASIC17.32■□□□□ 0.36
Vps35Q9EQH3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps35Q9EQH3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms