Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Gm29791-202ENSMUST00000207888 369 ntBASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upf1Q9EPU0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Gm27628-201ENSMUST00000184911 107 ntBASIC19.77■□□□□ 0.76
Upf1Q9EPU0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upf1Q9EPU0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Upf1Q9EPU0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Gm13418-201ENSMUST00000119097 944 ntBASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upf1Q9EPU0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upf1Q9EPU0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Mir3113-201ENSMUST00000175478 76 ntBASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.74■□□□□ 0.75
Upf1Q9EPU0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upf1Q9EPU0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms