Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Rrp8Q9DB85 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rrp8Q9DB85 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Gm28033-201ENSMUST00000184224 96 ntBASIC17■□□□□ 0.31
Rrp8Q9DB85 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rrp8Q9DB85 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rrp8Q9DB85 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rrp8Q9DB85 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gm11950-201ENSMUST00000121615 838 ntBASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gm18669-201ENSMUST00000216049 778 ntBASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rrp8Q9DB85 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.98■□□□□ 0.31
Rrp8Q9DB85 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rrp8Q9DB85 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Gm7153-201ENSMUST00000117092 455 ntBASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Gm6623-201ENSMUST00000173570 544 ntBASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Gm7461-201ENSMUST00000058918 827 ntBASIC16.96■□□□□ 0.31
Rrp8Q9DB85 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rrp8Q9DB85 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp8Q9DB85 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp8Q9DB85 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp8Q9DB85 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp8Q9DB85 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp8Q9DB85 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms