Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Gm29257-201ENSMUST00000186115 639 ntBASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Gm43183-201ENSMUST00000200632 547 ntBASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp4bQ9D8B3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp4bQ9D8B3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp4bQ9D8B3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp4bQ9D8B3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.82■■□□□ 1.08
Chmp4bQ9D8B3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Gm10517-202ENSMUST00000192970 758 ntBASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp4bQ9D8B3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp4bQ9D8B3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp4bQ9D8B3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp4bQ9D8B3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms