Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh2d4aQ9D7V1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Gm18671-201ENSMUST00000214826 683 ntBASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d4aQ9D7V1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d4aQ9D7V1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d4aQ9D7V1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d4aQ9D7V1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.79■□□□□ 0.28
Sh2d4aQ9D7V1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms