Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdhd3Q9CYW4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hdhd3Q9CYW4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Haglr-201ENSMUST00000100000 2085 ntBASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hdhd3Q9CYW4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hdhd3Q9CYW4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms