Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RTRAFQ9CQE8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.17□□□□□ -0.14
RTRAFQ9CQE8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Gm11421-201ENSMUST00000122124 294 ntBASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTRAFQ9CQE8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTRAFQ9CQE8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RTRAFQ9CQE8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
RTRAFQ9CQE8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTRAFQ9CQE8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms