Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Gm27011-201ENSMUST00000182352 972 ntBASIC16.99■□□□□ 0.31
Trim16Q99PP9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.99■□□□□ 0.31
Trim16Q99PP9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim16Q99PP9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.98■□□□□ 0.31
Trim16Q99PP9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.98■□□□□ 0.31
Trim16Q99PP9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Trmt13-210ENSMUST00000198454 880 ntBASIC16.98■□□□□ 0.31
Trim16Q99PP9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.98■□□□□ 0.31
Trim16Q99PP9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim16Q99PP9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim16Q99PP9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.97■□□□□ 0.31
Trim16Q99PP9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim16Q99PP9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.96■□□□□ 0.31
Trim16Q99PP9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim16Q99PP9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim16Q99PP9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trim16Q99PP9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim16Q99PP9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim16Q99PP9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim16Q99PP9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.95■□□□□ 0.3
Trim16Q99PP9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim16Q99PP9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim16Q99PP9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim16Q99PP9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms