Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim8Q99PJ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim8Q99PJ2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim8Q99PJ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim8Q99PJ2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim8Q99PJ2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.02■□□□□ 0.31
Trim8Q99PJ2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Gm37179-201ENSMUST00000194862 823 ntBASIC17.01■□□□□ 0.31
Trim8Q99PJ2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Gm6365-201ENSMUST00000054711 744 ntBASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim8Q99PJ2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.01■□□□□ 0.31
Trim8Q99PJ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17■□□□□ 0.31
Trim8Q99PJ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim8Q99PJ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim8Q99PJ2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim8Q99PJ2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms