Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Nck1Q99M51 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nck1Q99M51 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Nck1Q99M51 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.59■□□□□ 0.25
Nck1Q99M51 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.59■□□□□ 0.25
Nck1Q99M51 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nck1Q99M51 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nck1Q99M51 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nck1Q99M51 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nck1Q99M51 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nck1Q99M51 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nck1Q99M51 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Nck1Q99M51 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nck1Q99M51 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nck1Q99M51 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Nck1Q99M51 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.58■□□□□ 0.24
Nck1Q99M51 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nck1Q99M51 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.57■□□□□ 0.24
Nck1Q99M51 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.57■□□□□ 0.24
Nck1Q99M51 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.57■□□□□ 0.24
Nck1Q99M51 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.57■□□□□ 0.24
Nck1Q99M51 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nck1Q99M51 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Nck1Q99M51 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nck1Q99M51 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.56■□□□□ 0.24
Nck1Q99M51 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.56■□□□□ 0.24
Nck1Q99M51 Gm29791-202ENSMUST00000207888 369 ntBASIC16.56■□□□□ 0.24
Nck1Q99M51 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.56■□□□□ 0.24
Nck1Q99M51 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nck1Q99M51 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.55■□□□□ 0.24
Nck1Q99M51 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.55■□□□□ 0.24
Nck1Q99M51 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.55■□□□□ 0.24
Nck1Q99M51 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Nck1Q99M51 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Nck1Q99M51 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Mir8112-201ENSMUST00000184382 131 ntBASIC16.55■□□□□ 0.24
Nck1Q99M51 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.55■□□□□ 0.24
Nck1Q99M51 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Nck1Q99M51 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nck1Q99M51 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nck1Q99M51 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nck1Q99M51 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nck1Q99M51 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.54■□□□□ 0.24
Nck1Q99M51 Gm7514-201ENSMUST00000209475 934 ntBASIC16.54■□□□□ 0.24
Nck1Q99M51 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms