Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp1aQ921W0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chmp1aQ921W0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp1aQ921W0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chmp1aQ921W0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.33■□□□□ 0.05
Chmp1aQ921W0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1aQ921W0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1aQ921W0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Chmp1aQ921W0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1aQ921W0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Gm13234-201ENSMUST00000120010 747 ntBASIC15.32■□□□□ 0.04
Chmp1aQ921W0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms