Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdha11Q91Y19 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdha11Q91Y19 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.27■□□□□ 0.51
Pcdha11Q91Y19 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdha11Q91Y19 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Gm13559-201ENSMUST00000120476 863 ntBASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.25■□□□□ 0.51
Pcdha11Q91Y19 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Gm6433-201ENSMUST00000118634 875 ntBASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Gm7638-201ENSMUST00000121348 967 ntBASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha11Q91Y19 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Gm13836-201ENSMUST00000121159 501 ntBASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdha11Q91Y19 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms