Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdha8Q91Y12 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha8Q91Y12 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha8Q91Y12 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha8Q91Y12 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Gm20760-201ENSMUST00000179197 648 ntBASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Gm18025-201ENSMUST00000221733 862 ntBASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha8Q91Y12 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha8Q91Y12 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms