Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb1Q91Y08 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhb1Q91Y08 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb1Q91Y08 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb1Q91Y08 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Gm13168-201ENSMUST00000121771 632 ntBASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb1Q91Y08 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb1Q91Y08 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb1Q91Y08 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb1Q91Y08 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms