Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga4Q91XY4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga4Q91XY4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga4Q91XY4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga4Q91XY4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Gm11643-201ENSMUST00000119578 864 ntBASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga4Q91XY4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Gm12382-201ENSMUST00000122005 922 ntBASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga4Q91XY4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Mir2861-201ENSMUST00000175539 82 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Gm43183-201ENSMUST00000200632 547 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga4Q91XY4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga4Q91XY4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Gm42545-201ENSMUST00000202755 922 ntBASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.04■□□□□ 0.32
Pcdhga4Q91XY4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhga4Q91XY4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga4Q91XY4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms