Protein–RNA interactions for Protein: Q91XD6

Vps36, Vacuolar protein-sorting-associated protein 36, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36Q91XD6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps36Q91XD6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps36Q91XD6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vps36Q91XD6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps36Q91XD6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.77■□□□□ 0.59
Vps36Q91XD6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.76■□□□□ 0.59
Vps36Q91XD6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps36Q91XD6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps36Q91XD6 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.75■□□□□ 0.59
Vps36Q91XD6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.75■□□□□ 0.59
Vps36Q91XD6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.75■□□□□ 0.59
Vps36Q91XD6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps36Q91XD6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps36Q91XD6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.74■□□□□ 0.59
Vps36Q91XD6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Vps36Q91XD6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps36Q91XD6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.73■□□□□ 0.59
Vps36Q91XD6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps36Q91XD6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps36Q91XD6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.72■□□□□ 0.59
Vps36Q91XD6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps36Q91XD6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps36Q91XD6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vps36Q91XD6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps36Q91XD6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps36Q91XD6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps36Q91XD6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps36Q91XD6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps36Q91XD6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms