Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lims2Q91XD2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.78■□□□□ 0.44
Lims2Q91XD2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.78■□□□□ 0.44
Lims2Q91XD2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.78■□□□□ 0.44
Lims2Q91XD2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lims2Q91XD2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lims2Q91XD2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lims2Q91XD2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.77■□□□□ 0.44
Lims2Q91XD2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lims2Q91XD2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lims2Q91XD2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lims2Q91XD2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lims2Q91XD2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.76■□□□□ 0.43
Lims2Q91XD2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lims2Q91XD2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.75■□□□□ 0.43
Lims2Q91XD2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.75■□□□□ 0.43
Lims2Q91XD2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.75■□□□□ 0.43
Lims2Q91XD2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.75■□□□□ 0.43
Lims2Q91XD2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lims2Q91XD2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.74■□□□□ 0.43
Lims2Q91XD2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.74■□□□□ 0.43
Lims2Q91XD2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lims2Q91XD2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.73■□□□□ 0.43
Lims2Q91XD2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lims2Q91XD2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.72■□□□□ 0.43
Lims2Q91XD2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lims2Q91XD2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms