Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb21Q91V48 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Gm8969-201ENSMUST00000199694 526 ntBASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb21Q91V48 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb21Q91V48 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb21Q91V48 Idnk-204ENSMUST00000226010 1898 ntBASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Gm4974-201ENSMUST00000209974 875 ntBASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb21Q91V48 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb21Q91V48 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb21Q91V48 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb21Q91V48 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms