Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.16■□□□□ 0.34
Vsx1Q91V10 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm27357-201ENSMUST00000183754 135 ntBASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm7213-201ENSMUST00000215977 950 ntBASIC17.15■□□□□ 0.34
Vsx1Q91V10 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.15■□□□□ 0.34
Vsx1Q91V10 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vsx1Q91V10 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Gm11950-201ENSMUST00000121615 838 ntBASIC17.14■□□□□ 0.33
Vsx1Q91V10 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.14■□□□□ 0.33
Vsx1Q91V10 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.14■□□□□ 0.33
Vsx1Q91V10 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vsx1Q91V10 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.13■□□□□ 0.33
Vsx1Q91V10 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx1Q91V10 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Gm6443-201ENSMUST00000203599 874 ntBASIC17.12■□□□□ 0.33
Vsx1Q91V10 AW822252-206ENSMUST00000208904 237 ntBASIC17.12■□□□□ 0.33
Vsx1Q91V10 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx1Q91V10 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gm11355-201ENSMUST00000121120 306 ntBASIC17.11■□□□□ 0.33
Vsx1Q91V10 Gm24841-201ENSMUST00000158676 357 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms