Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.91□□□□□ -0.02
Cspg4Q8VHY0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Tgds-204ENSMUST00000228543 1594 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Mir770-201ENSMUST00000103252 94 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Gm8097-201ENSMUST00000117903 829 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Gm14057-201ENSMUST00000120631 482 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cspg4Q8VHY0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cspg4Q8VHY0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Gm1401-201ENSMUST00000122048 772 ntBASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cspg4Q8VHY0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cspg4Q8VHY0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms