Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Top1mtQ8R4U6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Top1mtQ8R4U6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Top1mtQ8R4U6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Top1mtQ8R4U6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Top1mtQ8R4U6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Gm27011-201ENSMUST00000182352 972 ntBASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Gm8520-201ENSMUST00000186517 868 ntBASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.75■□□□□ 0.91
Top1mtQ8R4U6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Top1mtQ8R4U6 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Top1mtQ8R4U6 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Top1mtQ8R4U6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Top1mtQ8R4U6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms