Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atf7Q8R0S1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.49■□□□□ 0.87
Atf7Q8R0S1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atf7Q8R0S1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Gm24841-201ENSMUST00000158676 357 ntBASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Atf7Q8R0S1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Atf7Q8R0S1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Atf7Q8R0S1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf7Q8R0S1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms