Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clip4Q8CI96 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clip4Q8CI96 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.47■□□□□ 0.39
Clip4Q8CI96 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.47■□□□□ 0.39
Clip4Q8CI96 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.47■□□□□ 0.39
Clip4Q8CI96 Mtag2-201ENSMUST00000058665 714 ntBASIC17.47■□□□□ 0.39
Clip4Q8CI96 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clip4Q8CI96 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.46■□□□□ 0.39
Clip4Q8CI96 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.46■□□□□ 0.39
Clip4Q8CI96 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clip4Q8CI96 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clip4Q8CI96 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.45■□□□□ 0.38
Clip4Q8CI96 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.45■□□□□ 0.38
Clip4Q8CI96 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clip4Q8CI96 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.44■□□□□ 0.38
Clip4Q8CI96 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clip4Q8CI96 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.43■□□□□ 0.38
Clip4Q8CI96 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Clip4Q8CI96 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms