Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Rsph6aQ8CDR2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Gm27389-201ENSMUST00000183622 195 ntBASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Gm7367-201ENSMUST00000057611 492 ntBASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.65■■□□□ 1.22
Rsph6aQ8CDR2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Rsph6aQ8CDR2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rsph6aQ8CDR2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rsph6aQ8CDR2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rsph6aQ8CDR2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Rsph6aQ8CDR2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rsph6aQ8CDR2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rsph6aQ8CDR2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Actl10-202ENSMUST00000226583 1501 ntBASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rsph6aQ8CDR2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Rsph6aQ8CDR2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Gm5587-201ENSMUST00000206270 674 ntBASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rsph6aQ8CDR2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Gm26039-201ENSMUST00000158152 144 ntBASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rsph6aQ8CDR2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms