Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13158-201ENSMUST00000122007 736 ntBASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Gm6576-201ENSMUST00000169678 883 ntBASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Gm27275-201ENSMUST00000184318 272 ntBASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc38Q8CDN8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc38Q8CDN8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Gm12441-201ENSMUST00000121806 588 ntBASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc38Q8CDN8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc38Q8CDN8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc38Q8CDN8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc38Q8CDN8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc38Q8CDN8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms